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作者:Hemm, Luisa; Lichtenberg, Elisabeth; Tholen, Stefan; Reimann, Viktoria; Kakazu, Kenta; Machida, Sotaro; Mahbub, Moontaha; Schilling, Oliver; Wilde, Annegret; Watanabe, Satoru; Mullineaux, Conrad W.; Hess, Wolfgang R.
作者单位:University of Freiburg; University of Freiburg; University of Freiburg; Tokyo University of Agriculture; University of London; Queen Mary University London
摘要:RNA recognition motif (RRM) domain proteins are crucial RNA- binding proteins across all domains of life. In cyanobacteria, single RRM domain proteins are involved in mRNA targeting to the thylakoid membrane and acclimation to certain stress conditions, but many details of their physiological functions and molecular targets have remained unknown. The model cyanobacterium Synechocystis sp. PCC 6803 has a family of three genes encoding the RRM domain-containing proteins Rbp1, Rbp2, and Rbp3. Her...
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作者:Waxman, Stephen G.; V. Vasylyev, Dmytro
作者单位:Yale University; Yale University; US Department of Veterans Affairs; Veterans Health Administration (VHA); VA Connecticut Healthcare System
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作者:Wu, Wan-fu; Song, Xiao-yu; Warner, Margaret; Imamov, Otabeck; Antonson, Per; Gustafsson, Jan-Ake
作者单位:University of Houston System; University of Houston; Karolinska Institutet
摘要:Estrogen receptor R (ERR) plays an important role in both the mouse and human prostate. The endogenous ligand for ERR is the dihydrotestosterone metabolite, 5R-androstane-3R, 17R-diol (3R-Adiol). Thus, treatment with 5-alpha reductase inhibitor (5-ARI) should produce a phenotype similar to that seen in ERR-/- mice. By comparing RNA-Seq of the ventral prostates (VP) of ERR knockout mice (ERRcrispr-/-) and wild-type (WT) mice, we confirmed that ERR modulates androgen receptor (AR) signaling indi...
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作者:Sushentsev, Nikita; Hamm, Gregory; Manavaki, Roido; McLean, Mary A.; Birchall, Jonathan; Soloviev, Dmitry; Lewis, David Y.; Aloj, Luigi; Flint, Lucy; Zakirov, Aleksandr; Mills, Ian G.; Gnanapragasam, Vincent J.; Warren, Anne Y.; Barry, Simon T.; Goodwin, Richard J. A.; Gallagher, Ferdia A.; Barrett, Tristan
作者单位:Cambridge University Hospitals NHS Foundation Trust; Addenbrooke's Hospital; University of Cambridge; University of Cambridge; AstraZeneca; University of Glasgow; University of Cambridge; University of Oxford; Queens University Belfast; Aarhus University; Cambridge University Hospitals NHS Foundation Trust; Addenbrooke's Hospital; University of Cambridge; AstraZeneca
摘要:Cribriform prostate cancer (crPCa) is associated with poor clinical outcomes, yet its accurate detection remains challenging due to the poor sensitivity of standard- of- care diagnostic tools. Here, we use untargeted spatial metabolomics to identify fatty acid biosynthesis as a key metabolic pathway enriched in crPCa epithelium. We also show that imaging tumor copy differentiates cribriform from noncribriform intermediate- risk prostate cancers in two prospective patient cohorts. These finding...
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作者:Jiang, Yuan; Liu, Qianwen; Stridh, Pernilla; Kockum, Ingrid; Olsson, Tomas; Alfredsson, Lars; Diaz-Gallo, Lina - Marcela; Jiang, Xia
作者单位:Karolinska Institutet; Karolinska Institutet; Karolinska Institutet; Sichuan University; Sichuan University
摘要:Multiple sclerosis (MS) is an immune-mediated disease with no current cure. Drug discovery and repurposing are essential to enhance treatment efficacy and safety. We utilized summary statistics for protein quantitative trait loci (pQTL) of 2,004 plasma and 1,443 brain proteins, a genome-wide association study of MS susceptibilitywith 14,802 cases and 26,703 controls, both bulk and cell-type specific transcriptome data, and external pQTL data in blood and brain. Our integrative analysis include...
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作者:Slavov, Gancho T.; Macaya-Sanz, David; DiFazio, Stephen P.; Howe, Glenn T.
作者单位:UK Research & Innovation (UKRI); Biotechnology and Biological Sciences Research Council (BBSRC); Institute of Biological, Environmental, Rural & Sciences (IBERS); Aberystwyth University; UK Research & Innovation (UKRI); Biotechnology and Biological Sciences Research Council (BBSRC); Rothamsted Research; West Virginia University; Consejo Superior de Investigaciones Cientificas (CSIC); Oregon State University
摘要:There is overwhelming evidence that forest trees are locally adapted to climate. Thus, genecological models based on population phenotypes have been used to measure local adaptation, infer genetic maladaptation to climate, and guide assisted migration. However, instead of phenotypes, there is increasing interest in using genomic data for gene resource management. We used whole-genome resequencing and common-garden experiments to understand the genetic architecture of adaptive traits in black c...
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作者:Aninta, Sabhrina Gita; Drinkwater, Rosie; Carmagnini, Alberto; Deere, Nicolas J.; Priyono, Dwi Sendi; Andayani, Noviar; Winarni, Nurul L.; Supriatna, Jatna; Fumagalli, Matteo; Larson, Greger; Galbusera, Peter H. A.; Macdonald, Alastair; Greer, Deborah; Mohamad, Kusdiantoro; Prasetyaningtyas, Wahono Esthi; Mustari, Abdul Haris; Williams, John Lewis; Barnett, Ross; Shaw, Darren; Semiadi, Gono; Burton, James; Seaman, David J. I.; Voigt, Maria; Struebig, Matthew J.; Brace, Selina; Rossiter, Stephen J.; Frantz, Laurent
作者单位:University of London; Queen Mary University London; University of Munich; University of Kent; Gadjah Mada University; University of Indonesia; University of Indonesia; University of Oxford; University of Edinburgh; Catholic University of the Sacred Heart; Durham University; Natural History Museum London
摘要:Island populations of large vertebrates have experienced higher extinction rates than mainland populations over long timescales due to demographic stochasticity, genetic drift, and inbreeding. While being more susceptible to extinction and as such potentially targeted for conservation interventions such as genetic rescue, small-island populations can experience relatively less anthropogenic habitat degradation than those on larger islands. Here, we determine the consequences and conservation i...
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作者:Bardy, Cedric; van den Hurk, Mark; Eames, Tameji; Marchand, Cynthia; Hernandez, Ruben, V; Kellogg, Mariko; Gorris, Mark; Galet, Ben; Palomares, Vanessa; Brown, Joshua; Bang, Anne G.; Mertens, Jeorme; Bohnke, Lena; Boyer, Leah; Simon, Suzanne; Gage, Fred H.
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作者:Bastani, Hamsa; Bastani, Osbert; Sungu, Alp; Ge, Haosen; Kabakci, Ozge; Mariman, Rei
作者单位:University of Pennsylvania; University of Pennsylvania
摘要:Generative AI is poised to revolutionize how humans work, and has already demonstrated promise in significantly improving human productivity. A key question is how generative AI affects learning-namely, how humans acquire new skills as they perform tasks. Learning is critical to long-term productivity, especially since generative AI is fallible and users must check its outputs. We study this question via a field experiment where we provide nearly a thousand high school math students with acces...
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作者:Das, Alakananda; Qiu, Yanping; Wolf, Trevor J.; Brissett, Ella; Cho, Jaehyoung; Park, Heenam; Chen, Eugene C.; Chou, Tsui - Fen; Sternberg, Paul W.
作者单位:California Institute of Technology; Claremont Colleges; Claremont Graduate University; Claremont McKenna College
摘要:Regulation of proteome homeostasis is crucial for the survival and adaptation to changing environments for all species. In eukaryotes, this process is finely tuned through regulation at the level of transcription, translation, protein modification, and protein degradation. The phospholipase A2 activating protein (PLAA) is present in all eukaryotes and believed to be a key player in ubiquitin-dependent protein sorting and degradation via its interactions with ubiquitin and/or the AAA+ ATPase, v...