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作者:Yu, Tianhao; Cui, Haiyang; Li, Jianan Canal; Luo, Yunan; Jiang, Guangde; Zhao, Huimin
作者单位:University of Illinois System; University of Illinois Urbana-Champaign; University of Illinois System; University of Illinois Urbana-Champaign; University of Illinois System; University of Illinois Urbana-Champaign; Cornell University; University System of Georgia; Georgia Institute of Technology; University of Illinois System; University of Illinois Urbana-Champaign
摘要:Enzyme function annotation is a fundamental challenge, and numerous computational tools have been developed. However, most of these tools cannot accurately predict functional annotations, such as enzyme commission (EC) number, for less-studied proteins or those with previously uncharacterized functions or multiple activities. We present a machine learning algorithm named CLEAN (contrastive learning-enabled enzyme annotation) to assign EC numbers to enzymes with better accuracy, reliability, an...
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作者:Nisbet, Rebecca M.
作者单位:Florey Institute of Neuroscience & Mental Health; University of Melbourne
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作者:Brainard, Jeffrey
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作者:Brainard, Jeffrey
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作者:Dunn, Rob
作者单位:North Carolina State University; North Carolina State University
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作者:Kinoshita, N.; Paul, M.; Kashiv, Y.; Collon, P.; Deibel, C. M.; DiGiovine, B.; Greene, J. P.; Jiang, C. L.; Marley, S. T.; Pardo, R. C.; Rehm, K. E.; Robertson, D.; Scott, R.; Schmitt, C.; Tang, X. D.; Vondrasek, R.; Yokoyama, A.
作者单位:Hebrew University of Jerusalem; University of Notre Dame; Louisiana State University System; Louisiana State University; United States Department of Energy (DOE); Los Alamos National Laboratory; United States Department of Energy (DOE); Argonne National Laboratory; Chinese Academy of Sciences; Institute of Modern Physics, CAS; Kanazawa University
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作者:Brainard, Jeffrey
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作者:Staniscuaski, Fernanda
作者单位:Universidade Federal do Rio Grande do Sul
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作者:Maienschein, Jane
作者单位:Arizona State University; Marine Biological Laboratory - Woods Hole
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作者:Gilad, Michal; Fishbein, Diana H.; Nave, Gideon; Packin, Nizan Geslevich
作者单位:University of North Carolina; University of North Carolina Chapel Hill; University of North Carolina School of Medicine; Pennsylvania Commonwealth System of Higher Education (PCSHE); Pennsylvania State University; Pennsylvania State University - University Park; University of Pennsylvania; City University of New York (CUNY) System; Baruch College (CUNY); University of Haifa