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作者:Giolai, Michael; Laine, Anna-Liisa
作者单位:University of Helsinki
摘要:Given the negative fitness effects that pathogens impose on their hosts, the benefits of resistance should be universal. However, there is marked variation across plant species in the number of nucleotide-binding leucine-rich repeat receptors, which form a cornerstone of defense. The growth-defense trade-off hypothesis predicts costs associated with defense investment to generate variation in these traits. Our analysis comparing features of the intracellular immune-receptor repertoires with tr...
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作者:Griffin, Jason
作者单位:University of Houston System; University of Houston
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作者:Stringer, Carsen; Pachitariu, Marius
摘要:Simultaneous recordings from hundreds or thousands of neurons are becoming routine because of innovations in instrumentation, molecular tools, and data processing software. Such recordings can be analyzed with data science methods, but it is not immediately clear what methods to use or how to adapt them for neuroscience applications. We review, categorize, and illustrate diverse analysis methods for neural population recordings and describe how these methods have been used to make progress on ...
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作者:Somerstein, Rachel
作者单位:State University of New York (SUNY) System; SUNY New Paltz
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作者:Lau, Andy M.; Bordin, Nicola; Kandathil, Shaun M.; Sillitoe, Ian; Waman, Vaishali P.; Wells, Jude; Orengo, Christine A.; Jones, David T.
作者单位:University of London; University College London; University of London; University College London; Birkbeck University London; University of London; University College London
摘要:The AlphaFold Protein Structure Database (AFDB) contains more than 214 million predicted protein structures composed of domains, which are independently folding units found in multiple structural and functional contexts. Identifying domains can enable many functional and evolutionary analyses but has remained challenging because of the sheer scale of the data. Using deep learning methods, we have detected and classified every domain in the AFDB, producing The Encyclopedia of Domains. We detect...
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作者:Yin, Xiaobo
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作者:Barron, Jerika J.; Mroz, Nicholas M.; Taloma, Sunrae E.; Dahlgren, Madelene W.; Ortiz-Carpena, Jorge F.; Keefe, Matthew G.; Escoubas, Caroline C.; Dorman, Leah C.; Vainchtein, Ilia D.; Chiaranunt, Pailin; Kotas, Maya E.; Nowakowski, Tomasz J.; Bender, Kevin J.; Molofsky, Ari B.; Molofsky, Anna V.
作者单位:University of California System; University of California San Francisco; University of California System; University of California San Francisco; University of California System; University of California San Francisco; University of California System; University of California San Francisco; University of California System; University of California San Francisco; University of California System; University of California San Francisco; Lund University; University of California System; University of California San Francisco; Chan Zuckerberg Initiative (CZI); University of California System; University of California San Francisco; University of California System; University of California San Francisco; University of California System; University of California San Francisco
摘要:The innate immune system shapes brain development and is implicated in neurodevelopmental diseases. It is critical to define the relevant immune cells and signals and their impact on brain circuits. In this work, we found that group 2 innate lymphoid cells (ILC2s) and their cytokine interleukin-13 (IL-13) signaled directly to inhibitory interneurons to increase inhibitory synapse density in the developing mouse brain. ILC2s expanded and produced IL-13 in the developing brain meninges. Loss of ...
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作者:Green, Miranda; Foster, Jane A.
作者单位:McMaster University; University of Texas System; University of Texas Southwestern Medical Center; University of Texas System; University of Texas Southwestern Medical Center; University of Texas System; University of Texas Southwestern Medical Center
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作者:Kupferschmidt, Kai
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作者:O'Grady, Cathleen