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作者:Farrell, Shane P.; Petras, Daniel; Stincone, Paolo; Yiu, Dara S.; Burns, John A.; Shah, Abzer Kelminal Pakkir; Hartmann, Aaron C.; Brady, Damian C.; Rasher, Douglas B.
作者单位:Bigelow Laboratory for Ocean Sciences; University of Maine System; University of Maine Orono; University of California System; University of California Riverside; Eberhard Karls University of Tubingen; Harvard University
摘要:In temperate regions experiencing rapid ocean warming, kelp forests are being replaced by chemically rich turf algae. However, the extent to which these turf algae alter the surrounding chemical environment or affect the rebound potential of kelp forests (through chemically mediated interactions) remains unknown. Here, we used underwater visual surveys, comprehensive chemical profiling, and laboratory experiments to reveal that turf algae release bioactive compounds into the water that fundame...
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作者:O'Grady, Cathleen
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作者:Guo, Amy B.; Akpinaroglu, Deniz; Stephens, Christina A.; Grabe, Michael; Smith, Colin A.; Kelly, Mark J. S.; Kortemme, Tanja
作者单位:University of California System; University of California San Francisco; University of California System; University of California San Francisco; University of California System; University of California San Francisco; University of California System; University of California San Francisco; Wesleyan University; University of California System; University of California San Francisco; Chan Zuckerberg Initiative (CZI)
摘要:Deep learning has advanced the design of static protein structures, but the controlled conformational changes that are hallmarks of natural signaling proteins have remained inaccessible to de novo design. Here, we describe a general deep learning-guided approach for de novo design of dynamic changes between intradomain geometries of proteins, similar to switch mechanisms prevalent in nature, with atomic-level precision. We solve four structures that validate the designed conformations, demonst...
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作者:Hannibal, Mary Ellen
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作者:Hernandez, Blake; Tetlak, Piotr; Domingo-Muelas, Ana; Akizawa, Hiroki; Skory, Robin M.; Ardestani, Goli; Biro, Mate; Liu, Xiaolei; Bissiere, Stephanie; Sakkas, Denny; Plachta, Nicolas
作者单位:University of Pennsylvania; University of Pennsylvania; University of Pennsylvania; Garvan Institute of Medical Research; European Molecular Biology Laboratory (EMBL); EMBL Australia; University of New South Wales Sydney; University of Pennsylvania
摘要:Following fertilization, the preimplantation embryo undergoes successive rounds of cell division and must accurately propagate the genetic material to ensure successful development. However, early mammalian embryos lack efficient spindle assembly mechanisms, and it remains unclear how error-free chromosome segregation is achieved. In this work, we imaged early mouse embryos and identified a network of nuclear actin cables that organize prophase chromosomes at the nuclear periphery. Following n...
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作者:Mervis, Jeffrey