Nongenetic adaptation by collective migration

• 成果类型: Article
• 署名作者: Vo, Lam; Avgidis, Fotios; Mattingly, Henry H.; Edmonds, Karah; Burger, Isabel; Balasubramanian, Ravi; Shimizu, Thomas S.; Kazmierczak, Barbara I.; Emonet, Thierry
• 署名单位: Yale University; Yale University; AMOLF; Simons Foundation; Flatiron Institute; Yale University; Yale University; Yale University
• 刊物名称: PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
• ISSN/ISSBN: 0027-11074
• DOI: 10.1073/pnas.2423774122
• 发表日期: 2025-02-25
• 关键词: escherichia-coli; bacterial persistence; chemotaxis; strategy; motility; survival; sequence; GROWTH; MODEL

摘要

Cell populations must adjust their phenotypic composition to adapt to changing environments. One adaptation strategy is to maintain distinct phenotypic subsets within the population and to modulate their relative abundances via gene regulation. Another strategy involves genetic mutations, which can be augmented by stress- response pathways. Here, we studied how a migrating bacterial population regulates its phenotypic distribution to traverse diverse environments. We generated isogenic Escherichia coli populations with varying distributions of swimming behaviors and observed their phenotype distributions during migration in liquid and porous environments. We found that the migrating populations became enriched with high- performing swimming phenotypes in each environment, allowing the populations to adapt without requiring mutations or gene regulation. This adaptation is dynamic and rapid, reversing in a few doubling times when migration ceases. By measuring the chemoreceptor abundance distributions during migration toward different attractants, we demonstrated that adaptation acts on multiple chemotaxis- related traits simultaneously. These measurements are consistent with a general mechanism in which adaptation results from a balance between cell growth generating diversity and collective migration eliminating underperforming phenotypes. Thus, collective migration enables cell populations with continuous, multidimensional phenotypes to flexibly and rapidly adapt their phenotypic composition to diverse environmental conditions.